PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02080.9.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 665aa    MW: 73414.7 Da    PI: 9.16
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02080.9.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.6e-08565614147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r ++T  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
  Migut.D02080.9.p 565 RRPFTVAEVEALVQAVEKLGTGRWRDVKLRAFdsaKHRTYVDLKDKWKTL 614
                       679***********************9988889**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF542362.29E-6366439IPR029071Ubiquitin-related domain
PROSITE profilePS500538.916371439IPR000626Ubiquitin domain
PROSITE profilePS5129415.175560619IPR017930Myb domain
SMARTSM007178.9E-8564617IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-10565615IPR009057Homeodomain-like
CDDcd116608.75E-18566616No hitNo description
SuperFamilySSF466896.4E-16566647IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    Send to blast
MGLMAIKCLP YPEPPDQPGC MFKKKADDNQ QMCAFDLLAT VAGKLLSDGE NNNTSSRKDI  60
PARVEDPVCK VEEDIKPPLD EKSSSGAHNY YERNFLFTEL VSEQNDAISR PASGITTSDC  120
SEKVNSAEQL VNDDCKLRLG IFTPSVDFYG SENESRKETK KIDIANNNNN NNNNNNNNNN  180
SNNNNNSNNN NNTKTMSIRN ASEGFDRKPS GLVCSVDNSV KFPFCKNPVN NINNNGESVN  240
LVNRDDDDNF SERARNKAAA LKSPPRVGDR RFRKLQHCAE RSNYVNRKNN SKRQRSLRDY  300
PFKKRKLYEC SGSVSNSDEG NSSGGIHRQN ENGTNPDGIG SGPTLPEVAA PPTPTSVAGG  360
YVSFRSRNSQ VKLKIKSFRV PELFIEIPET ATVGSLKRTV MEAVNAVLGG GLRVGVVVQG  420
KKIRDDNKTL LQTGISHDSN NSDNTLGFTL EPSPAPPPLL QSSYPESKPL PRYLAAVNNQ  480
QGNNNNNNVA LDTDTVSTPS PAADVPGSSF SNFMESDYDS APSHSRMSLS ESKALVPLCS  540
TKQDALAVVP FRKSKRSESV QRRIRRPFTV AEVEALVQAV EKLGTGRWRD VKLRAFDSAK  600
HRTYVDLKDK WKTLVHTARI SPQQRRGEPV PQELLDRVLT AHAYWSQQQA KQQLKSHPDT  660
CLLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2juh_A3e-545526554107Telomere binding protein TBP1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268274DRRFRKL
2291306KRQRSLRDYPFKKRKL
3296305LRDYPFKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02080.9.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827899.10.0PREDICTED: telomere repeat-binding protein 5 isoform X2
RefseqXP_012827900.10.0PREDICTED: telomere repeat-binding protein 5 isoform X2
RefseqXP_012827902.10.0PREDICTED: telomere repeat-binding protein 5 isoform X2
RefseqXP_012827903.10.0PREDICTED: telomere repeat-binding protein 5 isoform X2
TrEMBLA0A022PW090.0A0A022PW09_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.13e-93TRF-like 2