PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02077.1.p
Common NameMIMGU_mgv1a021527mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 637aa    MW: 72117.5 Da    PI: 7.281
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02077.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS365.95.7e-1122536292374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cAeavs+ +l++ ++lL++++ ++sp+gd+++Rla++f++AL+ar+++++  ly a+++++ +    se l+++++++  +P+ ++s
  Migut.D02077.1.p 253 SSLLTRCAEAVSNFNLAAGETLLKQIRSHCSPHGDANERLAHCFANALEARMSGTGAALYTAFASRRIQ---ASELLKSYQAYVTSCPFKRMS 342
                       689*********************************************************999999998...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN+ I + ++ + ++Hi+Df+i +G+QWp+++q L+ Rp+gpp lRiTgv+ p++g   +e++e+tg+rL +++++++vpf +n+ +ak+
  Migut.D02077.1.p 343 NIFANKSIGKYTKDAAKIHIVDFGILYGFQWPCIIQGLSLRPGGPPVLRITGVDYPQPGfkPAERIEQTGRRLVSYCKRFNVPFLYNA-IAKK 434
                       **********************************************************999***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       ++++++e+L+++++E+l+Vn++++l +++des           +rd+vLkl+k+++P+++v+   + ++n++ F++rf eal +ys++fd++e
  Migut.D02077.1.p 435 WDEVTVEDLKIEKDEMLVVNCMYRLRHVPDESSVGVGganappPRDSVLKLIKRIKPDLFVHGVVNGSYNAPFFATRFREALFHYSSFFDMME 527
                       *****************************998543323345569************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a+lpr++++r+ +Ere++gr+++nvvaceg+er+er et+++W  r ++aGF +++l  +++k++k  +r+ +   ++++e+ ++l++gWk+r
  Migut.D02077.1.p 528 ATLPRDDRDRMLYEREVFGRDVMNVVACEGSERIERPETYKQWTVRNQRAGFVQMHLYREIVKEVKIKIRQDYHTDFMLDEDGDWLLQGWKGR 620
                       ***********************************************************************99888***************** PP

              GRAS 366 pLvsvSaWr 374
                        ++++S+Wr
  Migut.D02077.1.p 621 VMYALSCWR 629
                       ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098561.297226609IPR005202Transcription factor GRAS
PfamPF035142.0E-109253629IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MGTLSRCDSR NGFQFVGHLS DPRFTNNVVV NMPGILSQNQ VVVNDEDAAA PVECDYFNGV  60
YEYLRQMLME EDDLDHRPCM FQDCSALQAA EKYFHDALSD TANSPPPPPP VPFSFSVNKQ  120
TGDADSILSA SDFPSWTLFE SDVVSGAGQR EGRSGKEKTH RSEYSGEDSQ RSGKQLASYE  180
AEDPAEIQKY DKSLLCPKMN PEFYNKTPPR GSDEKSDSDE ESKKQYRKTK EVKRGRPKGS  240
KKNRAVTEVV DLSSLLTRCA EAVSNFNLAA GETLLKQIRS HCSPHGDANE RLAHCFANAL  300
EARMSGTGAA LYTAFASRRI QASELLKSYQ AYVTSCPFKR MSNIFANKSI GKYTKDAAKI  360
HIVDFGILYG FQWPCIIQGL SLRPGGPPVL RITGVDYPQP GFKPAERIEQ TGRRLVSYCK  420
RFNVPFLYNA IAKKWDEVTV EDLKIEKDEM LVVNCMYRLR HVPDESSVGV GGANAPPPRD  480
SVLKLIKRIK PDLFVHGVVN GSYNAPFFAT RFREALFHYS SFFDMMEATL PRDDRDRMLY  540
EREVFGRDVM NVVACEGSER IERPETYKQW TVRNQRAGFV QMHLYREIVK EVKIKIRQDY  600
HTDFMLDEDG DWLLQGWKGR VMYALSCWRP NSQEST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A7e-502526295375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02077.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827860.10.0PREDICTED: scarecrow-like protein 11
TrEMBLA0A022PXQ10.0A0A022PXQ1_ERYGU; Uncharacterized protein
STRINGMigut.D02077.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27624191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-159SCARECROW-like 14