 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.D01856.1.p |
| Common Name | LOC105972558, MIMGU_mgv1a010726mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 305aa MW: 34737.2 Da PI: 4.4456 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.D01856.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.5 | 6.2e-20 | 88 | 141 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+e Le+ Fe ++++ e+r +LAk+lgL+ rq+ +WFqNrRa++k
Migut.D01856.1.p 88 KKRRLSVEQVEFLERSFEADNKLEPERRVQLAKELGLQPRQIAIWFQNRRARWK 141
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 118.2 | 4.5e-38 | 87 | 177 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrls eqv++LE+sFe+++kLeper+v+la+eLglqprq+a+WFqnrRAR+kt+++E+dye+L++++++lk++ ++L e+e L++e+
Migut.D01856.1.p 87 EKKRRLSVEQVEFLERSFEADNKLEPERRVQLAKELGLQPRQIAIWFQNRRARWKTRRVETDYETLHASFKSLKSDYDNLLLENEMLKTEV 177
69*************************************************************************************9887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MGKRGMVGGA GRGGGGDDEN QKVKVSSGER PLESVFASAP AKCYLASGSR TMLSFGVNKS 60
GNSLFQSFDQ EENIGGEYLD EYFGQPEKKR RLSVEQVEFL ERSFEADNKL EPERRVQLAK 120
ELGLQPRQIA IWFQNRRARW KTRRVETDYE TLHASFKSLK SDYDNLLLEN EMLKTEVLRL 180
KENGLDNGTE KSNLKFSDTK EISQAIPREA IDDLISEDDE AKVSFKNEEQ SSAKSDSTNE 240
ESPLLTNGVS SFHDFIEPDH SDISQNGEDE LKEEFFQLDY MFPRIEDARY YGFPVEEDHA 300
FDFW*
|
