PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01515.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 22982.6 Da PI: 6.5757 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 121.7 | 6.8e-38 | 1 | 120 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 deel+v+yLk+kv++++++ + i+ vd y+++P++L + + ++kewyfF+ r+kky++gkr+nr++ +gyWkat dk+++ +++ + Migut.D01515.1.p 1 DEELIVFYLKPKVDEQPVPP-SEINIVDFYQYDPQTLAdEhPSRLGQKEWYFFTFREKKYQNGKRPNRSAGNGYWKATAADKPIHLDqTEQII 92 9****************999.56**************74333444899************************************998566779 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g kk Lv+y+g+++ ++ktdW+mhey+l Migut.D01515.1.p 93 GYKKNLVYYEGDHKYSRKTDWIMHEYKL 120 **************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.06E-43 | 1 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.5E-20 | 1 | 120 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 43.723 | 1 | 152 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
DEELIVFYLK PKVDEQPVPP SEINIVDFYQ YDPQTLADEH PSRLGQKEWY FFTFREKKYQ 60 NGKRPNRSAG NGYWKATAAD KPIHLDQTEQ IIGYKKNLVY YEGDHKYSRK TDWIMHEYKL 120 PIADPTPKTE KLPEDENDMR LDSWVICRIH KRETKSNKAE LDDNNTHVAL PPPPQEMDEQ 180 RHHQHQQQHH HH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-37 | 1 | 158 | 25 | 174 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01515.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853254.1 | 1e-142 | PREDICTED: NAC transcription factor NAM-1-like | ||||
STRING | Migut.D01515.1.p | 1e-142 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14648 | 2 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 2e-44 | NAC domain containing protein 32 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01515.1.p |