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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.D01107.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
LBD |
| Protein Properties |
Length: 131aa MW: 14890 Da PI: 6.3495 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.D01107.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 110.6 | 1.2e-34 | 8 | 108 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
aCaaCk++rrkC ++Cvla+yfpae++ +f+nv +lFG++n lk+lk+++eee +++++sl++eAe+r++ Pv+G ++v +kl+ ++e++++e
Migut.D01107.1.p 8 ACAACKHQRRKCDQNCVLAKYFPAEKSDDFENVYHLFGMQNTLKILKSVEEEEGDATIESLIMEAEMRLEHPVHGHFSVTRKLSIEIEKTETE 100
7******************************************************************************************** PP
DUF260 94 lallkeel 101
l+ +++++
Migut.D01107.1.p 101 LEFVRKQI 108
***99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 131 aa
Download sequence Send
to blast |
MANVAQKACA ACKHQRRKCD QNCVLAKYFP AEKSDDFENV YHLFGMQNTL KILKSVEEEE 60
GDATIESLIM EAEMRLEHPV HGHFSVTRKL SIEIEKTETE LEFVRKQIQL CKGVDNRPGP 120
STREGRPDQL *
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