PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01005.1.p
Common NameLOC105972298, MIMGU_mgv1a001350mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 836aa    MW: 91942.8 Da    PI: 6.2421
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.1e-181472357
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      k  ++t+eq+++Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Migut.D01005.1.p 14 KYVRYTPEQVDALERLYHDCPKPSSVRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 72
                      5679*****************************************************97 PP
2START167.58.9e-531593672205
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++e+l+v+ +   g+ +
  Migut.D01005.1.p 159 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVEVLNVLPTPngGTTE 250
                       789*******************************************************.8888888888***************87557**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++l+p Rdf+ +Ry+  + +g++v++++S++++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h++l+++ ++++l
  Migut.D01005.1.p 251 LLYTQLYAPTTLAPgRDFWLLRYTSVMDDGSLVVCERSLSNTQNGPSmpaVQNFVRAEMLPSGYLIRPCDGGGSIIHIVDHMNLEAWNVPEVL 343
                       **********************************************999899***************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXXX CS
             START 182 rslvksglaegaktwvatlqrqce 205
                       r+l++s+++ ++k ++a+l+++++
  Migut.D01005.1.p 344 RPLYESSTVLAQKVTMAALRHLKQ 367
                       *******************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.418973IPR001356Homeobox domain
SMARTSM003891.6E-151177IPR001356Homeobox domain
SuperFamilySSF466891.75E-161476IPR009057Homeodomain-like
CDDcd000862.92E-161474No hitNo description
PfamPF000466.6E-161572IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.9E-181672IPR009057Homeodomain-like
CDDcd146864.03E-666105No hitNo description
PROSITE profilePS5084826.074149377IPR002913START domain
CDDcd088754.97E-77153369No hitNo description
SuperFamilySSF559619.89E-39158370No hitNo description
SMARTSM002341.7E-37158368IPR002913START domain
Gene3DG3DSA:3.30.530.204.5E-24158364IPR023393START-like domain
PfamPF018521.8E-50159367IPR002913START domain
PfamPF086701.9E-49692833IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    Send to blast
MPMSCKDSHM DNGKYVRYTP EQVDALERLY HDCPKPSSVR RQQLIRECPI LSNIEPKQIK  60
VWFQNRRCRE KQRKEASRLQ GVNRKLTAMN KLLMEENDRL QKQVSQLVYE NSYFRQHTPS  120
NALATKDTSC ESVVTGGQQN HLTPQHTPRD ASPAGLLSIA EETLTEFLSK ATGTAVEWVQ  180
MPGMKPGPDS IGIVAISHGC TGVAARACGL VGLEPTRVAE ILKDRPSWFR DCRAVEVLNV  240
LPTPNGGTTE LLYTQLYAPT TLAPGRDFWL LRYTSVMDDG SLVVCERSLS NTQNGPSMPA  300
VQNFVRAEML PSGYLIRPCD GGGSIIHIVD HMNLEAWNVP EVLRPLYESS TVLAQKVTMA  360
ALRHLKQIAQ DISQSSNVSN WGRRPAALRA LSHRLSRGFN EALNGFGDDG WSLIGNDGMD  420
DVTILVNSNP EKLMGLNISF TNGYTSISNS VLCAKASMLL QNVPPAILLR FLREHRSEWA  480
DNFDTYSAAA VKIGPSNFLG TRVANFGGQV VLPLAQTIEH EELLEVIKLE GVGQSPEDSM  540
MPRDLFLLQL CSGMDENAVG TCGELIFAPI DASFVEDAPL LPSGFRIIPL DPGKDASSPN  600
RTLDLASALE TGNKPSSDLA VTNGNSRSVM TIAFQFAFEN HMQENVACGA RQYVRSIISS  660
VQRVALALSS TNLGPNSGLR SMLGGTTPEA HTLARWICQS YRNYMGDELL KPNGEGSESI  720
LKALWHHSDA ILCCSLKAVP VFTFANQAGL DMLETTLVAL QDISLEKIFD DHGRKNLCSE  780
FPQIMNQGFA TLQGGICLSS MSRPISYERS VAWKVLDEDA NPHCFCFMFV NWSLV*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of meristem development to promote lateral organ formation. May regulates procambial and vascular tissue formation or maintenance, and vascular development in inflorescence stems. {ECO:0000269|PubMed:15598805, ECO:0000269|PubMed:15705957, ECO:0000269|PubMed:16617092}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01005.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin. Repressed by miR165 and miR166. {ECO:0000269|PubMed:15773855, ECO:0000269|PubMed:16033795, ECO:0000269|PubMed:16617092, ECO:0000269|PubMed:17237362}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852689.10.0PREDICTED: homeobox-leucine zipper protein ATHB-15
SwissprotQ9ZU110.0ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLA0A022QAS70.0A0A022QAS7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]