PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D00953.1.p | ||||||||
Common Name | LOC105948905, MIMGU_mgv1a012697mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 244aa MW: 26599 Da PI: 5.0928 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.2 | 6.8e-12 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT+eE+e l +v ++G+g Wk I +R+ ++k++w+++ Migut.D00953.1.p 5 KLKWTAEEEETLRAGVGKHGTGKWKNILLDPEfkeklSNRSNVDLKDKWRNL 56 689*************************9999999999************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.019 | 1 | 61 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.15E-15 | 3 | 58 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 8.8E-7 | 4 | 59 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.1E-8 | 5 | 56 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.7E-13 | 5 | 56 | IPR009057 | Homeodomain-like |
CDD | cd11660 | 6.84E-20 | 7 | 56 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MGNQKLKWTA EEEETLRAGV GKHGTGKWKN ILLDPEFKEK LSNRSNVDLK DKWRNLSVSG 60 GFGASSVTPR GKATVTNVVT PMTEISPSVF VSKETVNDRL PHSPPNVDNA LTDKMVLEAL 120 SSMKDCDGSD CDAIMGFVEV PKGYKIKEAE RGTKTPTPQQ HDVRSRPLQD STPTIIVDTV 180 EEAAKIAADL IAEAEYKSFL AAEAVKEAEK LSLIADNADV LLRSLKEILD EWDDKGNNKS 240 SKS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D00953.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012827958.1 | 1e-178 | PREDICTED: telomere repeat-binding factor 4-like | ||||
TrEMBL | A0A022S3K0 | 1e-177 | A0A022S3K0_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2504 | 23 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17520.1 | 2e-35 | MYB_related family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D00953.1.p |
Entrez Gene | 105948905 |