PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C01371.1.p | ||||||||
Common Name | LOC105974176, MIMGU_mgv1a021517mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 335aa MW: 37089.7 Da PI: 4.6817 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.5 | 1.2e-08 | 150 | 195 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+ R+++++ f L ++lP + kKl+Ka+ Le A +Y+k L+ Migut.C01371.1.p 150 HLMSERKHREHLRQLFISLSKILPGL-----KKLDKASLLEDAANYLKALE 195 8899**********************.....9****************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.075 | 145 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.84E-13 | 148 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.2E-6 | 149 | 195 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-10 | 149 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.53E-8 | 150 | 199 | No hit | No description |
SMART | SM00353 | 4.1E-8 | 151 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MEEYDDLLLD EEILFDLNPI LSEIYSSPLM ISSNTSSSSS EPQTSDDDGC VMKQLITSPI 60 IWESSSASAS APAPAPHMFS FGNNSYFPAA NSDILNSSST STTTPEVVVT NSTHDLSSQI 120 IDFSSSSVAA ANKHDSTTTT TRTPSQAHEH LMSERKHREH LRQLFISLSK ILPGLKKLDK 180 ASLLEDAANY LKALEERVAI LEEEQAKRSS IEASKLTHNC SYNTERRSID DDDDDENNNM 240 LEVPEIKARI SERKVLIKIS CKKEKGLMPL ISCEMEKMHL TLLDMRMMPF GGSAAALDIT 300 LLAETQSEFR GTVKDIVDHL QRVVLKNPPL QQQQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C01371.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854699.1 | 0.0 | PREDICTED: transcription factor bHLH18-like | ||||
TrEMBL | A0A022Q285 | 0.0 | A0A022Q285_ERYGU; Uncharacterized protein | ||||
STRING | Migut.C01371.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8864 | 16 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 3e-33 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.C01371.1.p |
Entrez Gene | 105974176 |