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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C00770.1.p | ||||||||
Common Name | LOC105963011, MIMGU_mgv1a006708mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | TALE | ||||||||
Protein Properties | Length: 435aa MW: 48909.6 Da PI: 6.5106 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.6 | 5.9e-10 | 359 | 396 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gL+++qV++WF N R + Migut.C00770.1.p 359 FEHflHPYPSDSEKLMLASQTGLSKNQVSNWFINARVR 396 664459******************************88 PP | |||||||
2 | BELL | 85.4 | 6.4e-28 | 230 | 292 | 10 | 72 |
BELL 10 akLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 kLl lleeV++rY+ y++ ++ ++ sFe++aglg+ k+Yt+lAl+a+S+hF L+ ai++qi Migut.C00770.1.p 230 LKLLALLEEVERRYEEYYHHMEDLVTSFEIIAGLGAGKSYTALALQAMSKHFWTLRSAIVSQI 292 59************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.7E-21 | 156 | 290 | IPR006563 | POX domain |
Pfam | PF07526 | 8.3E-31 | 161 | 289 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.147 | 337 | 400 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.09E-12 | 340 | 401 | No hit | No description |
SMART | SM00389 | 6.4E-10 | 340 | 404 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.3E-27 | 345 | 406 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.84E-18 | 346 | 407 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 8.1E-18 | 357 | 396 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence Send to blast |
MVSEDSPSNS NSSNLHQFII SNSIANQNHH FENHSFDPAS YSNINNNPNY FPNSLPFISR 60 TTTAADLIHG GGHVSPSDDS DMTHERRLMD LLGTSNGHHH HHNQQQQQRL SLSLGGSINN 120 PCRLNSGGYL NPDPDYQFTG PAFAAPHCST SSYQTEPFAA VVGSSKYLKS VQSLLQEMVS 180 VDDNEIDASN RRLVEKLSRK GSYGLSSDLK MELSNTEFVT KKHGVYICLL KLLALLEEVE 240 RRYEEYYHHM EDLVTSFEII AGLGAGKSYT ALALQAMSKH FWTLRSAIVS QIRATKQKIE 300 KDMPKISSRL AQLSLLDQES RSNRVSLQQI GIMHSSRQAW RPIRGLPETS VTILRAWLFE 360 HFLHPYPSDS EKLMLASQTG LSKNQVSNWF INARVRLWKP MIEEMYKEEF AESSTESDQL 420 LTREGVGDSA EDFD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 5e-17 | 346 | 404 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 5e-17 | 346 | 404 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C00770.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012842817.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 11 | ||||
Swissprot | Q1PFD1 | 5e-91 | BLH11_ARATH; BEL1-like homeodomain protein 11 | ||||
TrEMBL | A0A022QVZ8 | 0.0 | A0A022QVZ8_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8602 | 22 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75430.1 | 2e-82 | BEL1-like homeodomain 11 |
Link Out ? help Back to Top | |
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Phytozome | Migut.C00770.1.p |
Entrez Gene | 105963011 |