PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C00762.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 364aa MW: 39632.7 Da PI: 8.5634 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.9 | 4.8e-05 | 250 | 288 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq Migut.C00762.1.p 250 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 288 7788899*********998.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.312 | 238 | 287 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.29E-11 | 248 | 300 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.58E-5 | 248 | 292 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 7.0E-9 | 252 | 295 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MPPDLSFYSW SNNEHTFVQG NNNLQNPRNN NIKEEDHLSS EHYYRNYVDI LSSTASPNNN 60 SSRNNNNTAT DEQSNDYLGT KLLLKSFSSG NLMTKNPISP PDFYYNNNGG GGGASINGRG 120 LFCSSQIFPS VNVSSLSSNQ NFTNPTSLDM NLEALDLLTS SRFSGEFGGA SSQNQNQNGG 180 FSYGFDHHHM QQQVHQTTTP FYSTSKVSSG SSNGAVEAKR SGSRIEPKAP NAPKKSRLEA 240 RASCPPFKVR KEKLGDRIAA LQQLVAPFGK TDTASVLMEA IGYIKFLQSQ VETLSVPYMK 300 SSRNKSSRVL KVGVPMENEN EEQRRDLKSR GLCLVPLSCL SYMTDGDGGA AVWPPPHFGG 360 GAT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C00762.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012842795.1 | 0.0 | PREDICTED: transcription factor bHLH110 | ||||
Swissprot | Q9SFZ3 | 2e-62 | BH110_ARATH; Transcription factor bHLH110 | ||||
TrEMBL | A0A022R251 | 0.0 | A0A022R251_ERYGU; Uncharacterized protein | ||||
STRING | Migut.C00762.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7533 | 22 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 8e-56 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.C00762.1.p |
Publications ? help Back to Top | |||
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