PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C00675.1.p | ||||||||
Common Name | LOC105965619, MIMGU_mgv1a003541mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | TALE | ||||||||
Protein Properties | Length: 580aa MW: 63942.2 Da PI: 8.4653 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.6 | 5.8e-10 | 409 | 446 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe n+yps++++ L++++gL+++qV++WF N R + Migut.C00675.1.p 409 FEHflNPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 446 665569******************************88 PP | |||||||
2 | BELL | 102.3 | 3.4e-33 | 264 | 336 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgs.akpYtslAlkaiSrhFrcLkdaiaeqi 72 er e q++k kLl++l+eVd rY +y+eq+q+v++sFe ++g + a+pYt+lA +a+SrhFrc+kdai++q+ Migut.C00675.1.p 264 ERSEFQRRKIKLLTMLDEVDARYTRYCEQMQAVVNSFESAVGQAAaAAPYTTLARRAMSRHFRCIKDAIVGQL 336 789**************************************9865278**********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 6.0E-45 | 181 | 334 | IPR006563 | POX domain |
Pfam | PF07526 | 2.4E-43 | 187 | 333 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.503 | 387 | 450 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.28E-12 | 390 | 451 | No hit | No description |
SMART | SM00389 | 2.0E-9 | 390 | 454 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.33E-17 | 391 | 458 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.2E-28 | 393 | 456 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 5.6E-18 | 407 | 446 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence Send to blast |
MLRAQGGFDP PHPPPDSTAL PPVYDAGGML TEIINLVPPP DHQIQSNNYR WPHQKHHQHL 60 SAAAAVNELS FMNNNHHITD NSASSPPYNN TNNNQLQGFH LLSPAVVGPT AAMEPPWVHH 120 HTTTRSRMVE GQALSLSLSS SLRNNIEEAA KMYNFHNQDL GANNPESIFN NHFGMFESSS 180 SSANSSLRSS RYLRAGQELL GEFCCVVSIG AAQSNSRGKK FKNAVQGRNP NNNNNNNNSI 240 GGGDFATDPS SASKDVHRPI SPAERSEFQR RKIKLLTMLD EVDARYTRYC EQMQAVVNSF 300 ESAVGQAAAA APYTTLARRA MSRHFRCIKD AIVGQLKQTC EGLGEKDFLG GGGGGGGLTK 360 GETPRLKMLE QKYRQQKAMQ HIGMMDPDTW RPQRGLPERS VNILRAWLFE HFLNPYPSEA 420 DKHLLSRQTG LSKNQVSNWF INARVRLWKP MVEEMYQQEL QDHEVQPSTA QEPKQDASTS 480 MISTTTTTAG PSSSLTPTHN AASALQENDP SLNHTVRYRG KNPAGGAGPQ PPEYRYFMTR 540 DAAEAGVGGG DVSLTLGLRH SENHVPRMSR LSIRDFEAY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 1e-15 | 396 | 454 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 1e-15 | 396 | 454 | 5 | 63 | Homeobox protein Meis2 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. {ECO:0000269|PubMed:17873098}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C00675.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012845643.1 | 0.0 | PREDICTED: BEL1-like homeodomain protein 4 | ||||
Swissprot | Q94KL5 | 1e-114 | BLH4_ARATH; BEL1-like homeodomain protein 4 | ||||
TrEMBL | A0A022RYG5 | 0.0 | A0A022RYG5_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6072 | 17 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23760.3 | 3e-82 | BEL1-like homeodomain 4 |
Link Out ? help Back to Top | |
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Phytozome | Migut.C00675.1.p |
Entrez Gene | 105965619 |
Publications ? help Back to Top | |||
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