PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00567.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 241aa    MW: 26965.6 Da    PI: 8.5006
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00567.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind25.33.9e-082560237
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHH CS
      HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefa 37
                      Fl+k+y++++d+++++++sw e+ ++fvv+ + efa
  Migut.C00567.1.p 25 FLTKTYQLVDDAATDHIVSWGEDRSTFVVWRPWEFA 60
                      9******************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.0E-101766IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.4E-82178IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467851.14E-112278IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004473.3E-42555IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MGLMVENCEG IFLSLDSHKS MPAPFLTKTY QLVDDAATDH IVSWGEDRST FVVWRPWEFA  60
NDFFKKGEKH LLCEIHRRKT APPQPDHHHS VAGQNNERLR RNNNMLVSEL AHMKKLYTDI  120
IYFVQNHVKP VAAPPFFCNS SPPSSAASAA IINGSSSSSF LPQQQQQGNS FSQNSCTVRR  180
IVEDPPPQNR TKLFGVPLPL SSSSSKKRLH PEYNSSVETT KARLVIDQTH DLGLNLMPPC  240
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00567.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083880.12e-85heat stress transcription factor B-4-like
SwissprotQ9C6352e-54HSFB4_ARATH; Heat stress transcription factor B-4
TrEMBLA0A022QCV53e-90A0A022QCV5_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.C00567.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27212450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.16e-34heat shock transcription factor B4