PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.C00214.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bZIP

Protein Properties

Length: 361aa MW: 40841.5 Da PI: 6.4103

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.C00214.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.2	1.3e-11	77	105	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k++rr+++NReAAr+sR+RKka++++Le Migut.C00214.1.p 77 KNQRRLAQNREAARKSRLRKKAYVQQLES 105 99*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0019	73	133	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.956	75	112	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-7	77	106	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.35E-7	77	127	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.2E-8	77	124	No hit	No description
PROSITE pattern	PS00036	0	80	95	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	8.1E-27	162	236	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MTTPTTQFAP SSRMSLYEPL HQISMWEDAF DGDISPRTGV CLINDSDEKL DDKAEYTSDK 60 SIELIEDGHA SRGISEKNQR RLAQNREAAR KSRLRKKAYV QQLESSRLKL AQLELEIERA 120 RQQGMLIANA NASMGLCSPV NSGLGAFEME YGHWIEEQER KISELKNVLQ SPIGDVELRM 180 MVENMLNHYC NLFRMKKDAA RIDAFYLVSG MWRSSVERFF LWIGGFRPSE LINVVMPQLE 240 PLTDQQIANV GKLKHCCIQA EDALSQGMDK LQQTLAQSIT FLAPAPGNYC SQTASALENL 300 ESLESFVHQA DHLREQTLQQ MSRILTTRQA AKGLLAFGEY FQRLRALSSL WSARSPRETV 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MTTPTTQFAP SSRMSLYEPL HQISMWEDAF DGDISPRTGV CLINDSDEKL DDKAEYTSDK  60
SIELIEDGHA SRGISEKNQR RLAQNREAAR KSRLRKKAYV QQLESSRLKL AQLELEIERA  120
RQQGMLIANA NASMGLCSPV NSGLGAFEME YGHWIEEQER KISELKNVLQ SPIGDVELRM  180
MVENMLNHYC NLFRMKKDAA RIDAFYLVSG MWRSSVERFF LWIGGFRPSE LINVVMPQLE  240
PLTDQQIANV GKLKHCCIQA EDALSQGMDK LQQTLAQSIT FLAPAPGNYC SQTASALENL  300
ESLESFVHQA DHLREQTLQQ MSRILTTRQA AKGLLAFGEY FQRLRALSSL WSARSPRETV  360
*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.C00214.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012829825.1	0.0	PREDICTED: transcription factor TGA4-like isoform X2
Swissprot	Q39162	1e-142	TGA4_ARATH; Transcription factor TGA4
TrEMBL	A0A022RX73	0.0	A0A022RX73_ERYGU; Uncharacterized protein
STRING	Migut.C00214.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA780	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-137	TGACG motif-binding factor 4

Link Out ? help Back to Top
Phytozome	Migut.C00214.1.p

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana. Plant J., 2017. 92(2): p. 305-316 [PMID:28771873]