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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.B01884.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
bHLH |
Protein Properties |
Length: 550aa MW: 60206.8 Da PI: 8.6257 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.B01884.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.7 | 8.8e-13 | 391 | 437 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq
Migut.B01884.1.p 391 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 437
799***********************66......*****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 550 aa
Download sequence Send
to blast |
MKLGLGMGGV GWSNEDKATA AAVLGTKAFD YLISSSVSAE CSLMAIGNNE NLQNKLSDLV 60 EHQHPTRISW NYAIFWQLSR SKSGEFVLGW GDGCCREPRE NEGSEFTRNP KSRIEDESLQ 120 RMRKRVLQRM HTLFGGTDED SYAFGLDKVT DTEMFFLASM YFSFPRGVGG PGKCFGSSKY 180 VWLTNAMVTP VDYCVRSFLA KSAGMQTIVL IPTDVGVVEL GSARYIAENS EVLNAIGSSF 240 SSSSRNKQVA AVGPMKKDSI SNGIFSNPVA ATRQETVTTK IFGQELNAVR PQIMEKVDGR 300 NRDADADVNG NRMPTRNGFH PSAWTNSNYG NATGASSMSV ISRPQSVESE HSDIEAASCK 360 LEEPVGVLLL EDKKPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNISKM 420 DKASLLGDAI AYITELQRKV KDMESERGGE ASASEASNKN VLEVQEWGSR VEVEAGRDKV 480 TVRVSCPVGA HPASRVIRAI KDAGGNIVDA QMATGSERVF HTFVVKSNGS DRLTKEKMIE 540 AFSRGSNSL*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_B | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_E | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_F | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_G | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_I | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_M | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
5gnj_N | 1e-29 | 385 | 447 | 2 | 64 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 372 | 380 | KKPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |