PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01832.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 310aa    MW: 34119.8 Da    PI: 5.0071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01832.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19110160155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++++GVr+++ +grW+AeIrdp   ++r r++lg+++taeeAa  +++a+  ++g
  Migut.B01832.1.p 110 KKFRGVRQRP-WGRWAAEIRDP---NRRGRVWLGTYDTAEEAAMVYDKAAIGIRG 160
                       59********.**********9...3359*********************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.15E-30110167No hitNo description
Gene3DG3DSA:3.30.730.101.3E-29111168IPR001471AP2/ERF domain
PROSITE profilePS5103222.998111168IPR001471AP2/ERF domain
SMARTSM003808.2E-34111174IPR001471AP2/ERF domain
PfamPF008479.3E-13111160IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-20111167IPR016177DNA-binding domain
PRINTSPR003675.7E-10112123IPR001471AP2/ERF domain
PRINTSPR003675.7E-10134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MNPPNMQEKP FKYSVSTTVT TKLVPSPPSR GGGALGTRTP RVVRISVTDG DATDSSGDEC  60
GDMRFRHVRK HVQEIRVEAE SVYYANNGMQ KKKRAAPPRG PPPDEKGKAK KFRGVRQRPW  120
GRWAAEIRDP NRRGRVWLGT YDTAEEAAMV YDKAAIGIRG PDAMTNFIQP PRIATAEAAA  180
AVTSVSGDDS AAKEEACENP SSSPTSVLRF TTNGGANMSE SEFKNNNNND VENRTARNEF  240
LIGDCLPLDE SFLNSLSDFQ PHAPLIFDFP EQVLGDGSNF HLGEDIDSFK SDLNDFFDFN  300
DFDDQFLFA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-20108177270ATERF1
3gcc_A2e-20108177270ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01832.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844004.10.0PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A022QXX10.0A0A022QXX1_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-39cytokinin response factor 4