PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B01672.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 372aa MW: 39246.4 Da PI: 10.6868

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B01672.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.5	2e-37	81	187	3	111
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.kaaks 93 k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+qa+pai ++tgt++ +a ++ +++ + + + +++++ Migut.B01672.1.p 81 MKRSSTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIRWLLEQAEPAIVAATGTGTVPAIAMsVNGTLKIRPQ----PlHRRRA 169 6999***********************************************************9999955532222222222....1222222 PP TCP 94 aakskksqksaasalnla 111 aa+++++++ +a++ +++ Migut.B01672.1.p 170 AAEGSHEPQAQAEFVDVN 187 223333333333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.4E-30	85	164	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	27.172	86	140	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MASSQDKDFR RDNSEVELSA AAREFKIFSS HDQRQPPPPT AAAQPLRAAA PLLKEEEHDH 60 TMAEKPTPQP PPAGTVPPPQ MKRSSTKDRH TKVEGRGRRI RMPAACAARV FQLTRELGHK 120 SDGETIRWLL EQAEPAIVAA TGTGTVPAIA MSVNGTLKIR PQPLHRRRAA AEGSHEPQAQ 180 AEFVDVNGVS CPPPSNSAAA TATAGANNFS IISSNNSAII STNGASVSAP LMSVIPISAM 240 WAIPIVASNS NSSTPTFLIF PPNQTAQTVL AFQPTAAAAA LNVTPVVNFS AAPRPVSAFL 300 SAMQPAVRMP QMNLQTFMSS NSAAERPSFP SSSNGGGGSA ANKAQMLREI SWDIRDKKEL 360 PAAMATRSAK N*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MASSQDKDFR RDNSEVELSA AAREFKIFSS HDQRQPPPPT AAAQPLRAAA PLLKEEEHDH  60
TMAEKPTPQP PPAGTVPPPQ MKRSSTKDRH TKVEGRGRRI RMPAACAARV FQLTRELGHK  120
SDGETIRWLL EQAEPAIVAA TGTGTVPAIA MSVNGTLKIR PQPLHRRRAA AEGSHEPQAQ  180
AEFVDVNGVS CPPPSNSAAA TATAGANNFS IISSNNSAII STNGASVSAP LMSVIPISAM  240
WAIPIVASNS NSSTPTFLIF PPNQTAQTVL AFQPTAAAAA LNVTPVVNFS AAPRPVSAFL  300
SAMQPAVRMP QMNLQTFMSS NSAAERPSFP SSSNGGGGSA ANKAQMLREI SWDIRDKKEL  360
PAAMATRSAK N*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B01672.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012843937.1	0.0	PREDICTED: transcription factor TCP9
TrEMBL	A0A2G9HFB0	1e-130	A0A2G9HFB0_9LAMI; Uncharacterized protein
STRING	Migut.B01672.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-47	TCP family protein

Link Out ? help Back to Top
Phytozome	Migut.B01672.1.p