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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.B01572.1.p |
Common Name | LOC105963664, MIMGU_mgv1a009702mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
SBP |
Protein Properties |
Length: 335aa MW: 36963.3 Da PI: 8.3129 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.B01572.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 131.1 | 3.8e-41 | 179 | 256 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
+Cq+egC+adl++ak+yhrrhkvC++hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+
Migut.B01572.1.p 179 RCQAEGCNADLTHAKHYHRRHKVCDFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQ 256
6**************************************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MLDYGWGNPS SIMLSGDDNH QDSDQNRSIF DPYATQNFSD AANFMNPPET HHYSAVPTND 60 NPHNHHQLPF HHQNPNSSNH FTSFYDSRAY SAAASSYQHH PHAAAAAASM LTLEPAGGQT 120 GYMMVPKSEP VNVGGLEYNS RIGLNLGGRT YFASSEDDFV NRLYRRSRAL EPGSMNSPRC 180 QAEGCNADLT HAKHYHRRHK VCDFHSKAST VIAAGLTQRF CQQCSRFHLL SEFDNGKRSC 240 RKRLADHNRR RRKSQQPSQE NPNKSHQLIE STATNSSSEN LATRSPPDSG HHSSSVTVAV 300 SPPRISLDCF GQRSYIGGTT SSTSSTSSLF YSNG*
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Functional Description ? help
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Source |
Description |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Binds specifically to the 5'-GTAC-3' core sequence. Involved in development and floral organogenesis. Required for ovule differentiation, pollen production, filament elongation, seed formation and siliques elongation. Also seems to play a role in the formation of trichomes on sepals. May positively modulate gibberellin (GA) signaling in flower. {ECO:0000269|PubMed:12671094, ECO:0000269|PubMed:16095614, ECO:0000269|PubMed:17093870}. |