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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.B01361.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 376aa MW: 40876.1 Da PI: 5.7245 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.B01361.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55 | 1.3e-17 | 215 | 269 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
Migut.B01361.1.p 215 RKKLRLSKEQSAFLEDSFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 269
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 127.8 | 4.5e-41 | 215 | 304 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlskeq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l
Migut.B01361.1.p 215 RKKLRLSKEQSAFLEDSFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-SL 304
69*************************************************************************************9.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MELGLSLGDV SEPYGFLKKN NQQQKPISKK SGTLDFCMDL GLKSPAIVGN QETEKSEDDG 60
DDDGGDEDDG GDESDDDDDV RGGGETTPLK LSLVPFAPPQ ISSHLPWSSD NGSSENGSSG 120
NMGMRPGRIG FDVNRPAAAA EEVSSTNSMG GGGGSPFGHH LGFNMFRNTA TGNHQPRGQK 180
RVLESSAAGS DGAEAERTSS PRATSDDDEN ALNARKKLRL SKEQSAFLED SFKEHNTLNP 240
KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL KRCCETLTEE NRRLQKELQE 300
LRSLKTSSNN PFYMQLPATT LTMCPSCERV ASTPTPAAAV DSTAAQKAVP FPVTRPRFYP 360
FSQSPTRHNH QPAAS*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 263 | 271 | RRARTKLKQ |
