PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01175.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 322aa    MW: 34953.2 Da    PI: 7.4114
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01175.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023116138123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C++ Fs++  L  H++ H
  Migut.B01175.1.p 116 FTCNFCKRGFSTSQALGGHQNAH 138
                       89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.59E-6113143No hitNo description
Gene3DG3DSA:3.30.160.601.8E-4114142IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.531116143IPR007087Zinc finger, C2H2
PROSITE patternPS000280118138IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEQEKATTTT VVEPSSSHSE ASNISATSEE SPIKDDVDSS KNKEKIVEKD ESETKLRVVL  60
DLTVANEEEG KNPNSKKIEL NLFNSNNNNN SSNIASESSN EGGGNPGKPA AEPKTFTCNF  120
CKRGFSTSQA LGGHQNAHKQ ERAQAKHRNG MAEMSGGPGA PPPPPPPYGY PYYHHHPGGP  180
YAAYQQVPYY SSPYSRSPSS SSLLGVRTES MIHKPHAYHP YNNGYRYGHE KLARAYLISP  240
SPSTSYDRLR MDNFQTHQIS GSGLGLGLGV NPNNPIRIDN DTCNVVRSKP NEVKNNRGLR  300
LANDGGNEQT DGSGLDLNLR L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01175.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849915.10.0PREDICTED: zinc finger protein 3-like
TrEMBLA0A022QH690.0A0A022QH69_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39672138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G27880.18e-14C2H2 family protein