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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.B01081.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
Trihelix |
Protein Properties |
Length: 164aa MW: 18958.9 Da PI: 4.7066 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.B01081.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 49.4 | 1.2e-15 | 24 | 66 | 44 | 87 |
trihelix 44 erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
++s+ Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
Migut.B01081.1.p 24 QKSARCCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 66
7899***********************8.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MHDLLHRTKR QNSTPQCPHL LTHQKSARCC KEKWENINKY FKKVKESNKK RPEDSKTCPY 60 FHQLDAIYRE RGSKSDVVSF PGYGLNPDDN NPMMLPPPIM ARPEQQWPLP PDEQRQPPDQ 120 FQDNESDQDD VDGDEDDEED EAQCFEIVIN KQQSSVTTTN AAD*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975443 | 1e-34 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |