PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01075.1.p
Common NameLOC105974565, MIMGU_mgv1a004059mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 547aa    MW: 62245.5 Da    PI: 6.8324
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.62.8e-12117178268
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                       W+++evlaL+++r+ me ++ +       W ++s+k++e gf+rs++qCk+++++  k     ++ +
  Migut.B01075.1.p 117 WSDEEVLALLRLRSTMEIWFPDF-----TWLHISRKLSELGFKRSAEQCKDRFDQETKHLNTSTNVN 178
                       ********************998.....9************************99888766666555 PP
2trihelix88.57.6e-28422520186
          trihelix   1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                       rW+++evlaLi++r ++  ++++++              +  plWe++s+ m e g++r++k+Ckekwen+nk+++k+k+++kkr s +s+tc
  Migut.B01075.1.p 422 RWPRDEVLALINLRCKLSGSSSSSNsnedvehgemvsaaKGIPLWERISQGMTELGYKRNAKRCKEKWENINKYFRKTKDSNKKR-SINSRTC 513
                       8**************998888877566777778888876889******************************************8.78888** PP

          trihelix  80 pyfdqle 86 
                       pyf+ql+
  Migut.B01075.1.p 514 PYFQQLT 520
                       *****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.5113170IPR001005SANT/Myb domain
PfamPF138371.4E-9115178No hitNo description
PROSITE profilePS500907.004116168IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.600.001116168IPR009057Homeodomain-like
SMARTSM007172.1419495IPR001005SANT/Myb domain
CDDcd122035.54E-21421500No hitNo description
PfamPF138371.4E-17421521No hitNo description
PROSITE profilePS500906.191422493IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0001158Molecular Functionenhancer sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MFDGVSSSSS EQFHQFMAAR TTSSSSSLIA NNYPLMSSFS NLHHHHQENP SSNFSAGFDN  60
TYSSSSPSLV LHHHHNHHHH QESSPPNNNT TTKEDTDIDV DVDVDVKHVV IGSIDPWSDE  120
EVLALLRLRS TMEIWFPDFT WLHISRKLSE LGFKRSAEQC KDRFDQETKH LNTSTNVNFN  180
KNNYRNILMS ELDEFYPPAD QEQPPVSPPK QIDQKLLYKN VNVELESEAN LAPNPSQESE  240
DAVIMTTTTK KPINKRRKKK RKDKFEIFKG FCQAVVNKMM AQQEDLHNKL IDDIVKRDKE  300
TIARDEARKN EEMERLKREM DVRAKEQAIA RERQAALIEF LKKFTSQEDE DENIVNNEAF  360
NSFVTSSVLC PDKETAAAAS STTTTTATTT TILTELPRQI YKTPSPVNIV HEERGGGDLG  420
KRWPRDEVLA LINLRCKLSG SSSSSNSNED VEHGEMVSAA KGIPLWERIS QGMTELGYKR  480
NAKRCKEKWE NINKYFRKTK DSNKKRSINS RTCPYFQQLT SLYSQPGTVL LVGPPTNNII  540
NNVPEN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249259KKPINKRRKKK
2249261KKPINKRRKKKRK
3254262KRRKKKRKD
4255260RRKKKR
5255261RRKKKRK
6255262RRKKKRKD
7256262RKKKRKD
8256263RKKKRKDK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00011PBMTransfer from AT5G28300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01075.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855133.10.0PREDICTED: trihelix transcription factor GTL2
SwissprotQ8H1818e-71GTL2_ARATH; Trihelix transcription factor GTL2
TrEMBLA0A022Q4T80.0A0A022Q4T8_ERYGU; Uncharacterized protein
STRINGMigut.B01075.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137001013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-68Trihelix family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]