PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00803.2.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 560aa    MW: 58369 Da    PI: 8.0869
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00803.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1294.6e-401612912103
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 
                       ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  + s +ss+s+ s++     
  Migut.B00803.2.p 161 PPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTLSAPpsksa 253
                       5679*****************************************************************999878888888885555566666 PP

               TCP  89 .......................kaaksaakskksqks 103
                                              +   ++++++++q++
  Migut.B00803.2.p 254 phsfhsalglahhpypyneenfsHMLGFHHPHQQQQQQ 291
                       77777666666666666655443222222222222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.6E-41166326IPR005333Transcription factor, TCP
PROSITE profilePS5136928.496167221IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001047Molecular Functioncore promoter binding
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MELTDSKSNK QQSNTTTSTI PTTAGAVTSS SASQSYNLAP PHLLHRLHGR SPPFVIASLH  60
SPSGGGGGGG GGGGGSSSPA SITAGSNSSS IVAQQQPSPP QLVDASLAIA TRAETLIDHQ  120
AAAAAAAASK RPAQQQQKQL VVQPTQQPSA AAAEQQQAQP PPPKRSTKDR HTKVDGRGRR  180
IRMPATCAAR VFQLTRELGH KSDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNISLRS  240
SGSTLSAPPS KSAPHSFHSA LGLAHHPYPY NEENFSHMLG FHHPHQQQQQ QSPHLLQAAQ  300
MAENLAGGSG GGQETTDNYL RKRYREDLFK DEGPSNNSHG GDGTTSPSNK QFKTHNNNAQ  360
IMQKAEGAAA AAAAQSPGSL MRHANMMPPT AAMWAVTPAA PTTGVSGSTF WMLPVTAAGG  420
GSGGGNTPSS SGPPEAAQMW PFAANPHGGG STVQAPLHFM PRFNYSGNLD FQGGRSSPLQ  480
LGSILMQQQN QNPSQHLGLG VSPESNLGML AAMNAYSRSG LNMNSDNNNN NLDQQQQQQH  540
QTHQATTDSE DEDGQNSSQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16275SGGGGGGGGGGGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00803.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850409.10.0PREDICTED: transcription factor TCP8-like
TrEMBLA0A2G9HCW80.0A0A2G9HCW8_9LAMI; Uncharacterized protein
STRINGMigut.B00803.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.13e-78TCP family protein