PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00653.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bZIP | ||||||||
Protein Properties | Length: 250aa MW: 26850.1 Da PI: 6.1637 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.5 | 9.2e-16 | 166 | 225 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++r++kNRe+A rsR+RK+a++ eLe+ v +Le+eN +L + el+ke +k +e+ Migut.B00653.1.p 166 QQKQKRMIKNRESAARSRERKQAYTVELETLVTQLEEENAKLLEDEAELNKERYKQLMEN 225 689*****************************************9999999999877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-14 | 162 | 222 | No hit | No description |
SMART | SM00338 | 6.9E-13 | 163 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.254 | 165 | 217 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.7E-15 | 165 | 225 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.95E-19 | 167 | 214 | No hit | No description |
SuperFamily | SSF57959 | 7.5E-11 | 167 | 219 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 170 | 185 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MASSKVMAST SPPNRDHPRQ PSPSRLNLHS DQSRGLGSMN IDDILRNIYS DSESIVLEDS 60 SAAANGESSM TLEDFLAKAG AVDEDEVRVS AAAATPAAAG GFGMDAANMV HAAGVPAVHY 120 SPAMGVPGGG YGVDFADGTA AVTGGGGRGK RKAAAGEEFP IDKATQQKQK RMIKNRESAA 180 RSRERKQAYT VELETLVTQL EEENAKLLED EAELNKERYK QLMENLIPVV EKRRPKPPRV 240 IRRVQSMEW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00653.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012828373.1 | 0.0 | PREDICTED: G-box-binding factor 4-like | ||||
TrEMBL | A0A022PRZ2 | 1e-143 | A0A022PRZ2_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00653.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 4e-20 | G-box binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00653.1.p |