PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00443.1.p | ||||||||
Common Name | LOC105957402, MIMGU_mgv1a024176mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 319aa MW: 35759.3 Da PI: 4.6057 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34 | 5.2e-11 | 241 | 281 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+AveY+k Lq Migut.B00443.1.p 241 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 281 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.301 | 231 | 280 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-14 | 231 | 296 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.9E-13 | 236 | 290 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.7E-11 | 237 | 286 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.21E-12 | 240 | 285 | No hit | No description |
Pfam | PF00010 | 2.7E-8 | 241 | 281 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MEHIGAISER EWTSLNGMCS EEAEFMSQFL GNCSSYPNEV TGFSNFPVSC AFWPSQESTN 60 ESAMYSSDET NTSVYSFSQG SGYSGGIVFP FSSNESYHHH HHPSGPHQVF LTNSNLMTMD 120 YCTTESKEKD SDDFLNHDVS NDSVESMSEA IQMPDLKKEE KYIAPLESKK RSRVSSEIDD 180 NEEDNCRSIK RQNSSSCFSE DESNVSHEMN SSSKLSGALN LDGKTRASRG SATDPQSLYA 240 RKRRERINER LRILQNLVPN GTKVDISTML EEAVEYVKFL QLQIKLLSSD DLWMYSPIAY 300 NGMDIGLDLR IATPKPQS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00443.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836777.1 | 0.0 | PREDICTED: transcription factor bHLH54-like | ||||
TrEMBL | A0A022RB65 | 0.0 | A0A022RB65_ERYGU; Uncharacterized protein | ||||
STRING | Migut.B00443.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA639 | 22 | 101 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 2e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00443.1.p |
Entrez Gene | 105957402 |