PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00182.1.p
Common NameLOC105957695, MIMGU_mgv1a009692mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 335aa    MW: 36939.3 Da    PI: 6.4019
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00182.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-18252285134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++C++ kTp+WR gp g+ktLCnaCG+++++ +
  Migut.B00182.1.p 252 CTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 285
                       *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169923.9E-7714326IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011412.123246282IPR000679Zinc finger, GATA-type
SMARTSM004017.9E-16246296IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.04E-14249309No hitNo description
Gene3DG3DSA:3.30.50.102.7E-14249283IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.84E-13251308No hitNo description
PROSITE patternPS003440252277IPR000679Zinc finger, GATA-type
PfamPF003202.8E-16252285IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MECIEARALK SSFLSQMAMK ANSQVFYNDD VWCLTGINSG GGAADDFPDV DELLNLDFPE  60
KEFQEVLCFS QEDDDVTHKE GSHHSSTSTF SGADDFDSLS AGELPVPSDD LENLEWLSQF  120
VDDTTSSGLS LLCPAGSFTE RAEPNFANRV VTVNRPLRKI QAPFLLTPIP VKARSKRSRS  180
NGRPWSLSSP PLSSGDSSST TSSSYGSSIL SPFLFTTPVR ETEWFSTGEK PAKKLKRKPA  240
ETETGSISGR RCTHCQVQKT PQWRTGPLGP KTLCNACGVR FKSGRLFPEY RPAFSPTFSH  300
EVHSNSHRKV LEMRRRKETV EFPEPGSPLM VQSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00182.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837106.10.0PREDICTED: GATA transcription factor 5-like
TrEMBLA0A022RDN20.0A0A022RDN2_ERYGU; GATA transcription factor
STRINGMigut.B00182.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11542481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-54GATA transcription factor 5