PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01168.1.p
Common NameMIMGU_mgv1a017649mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 281aa    MW: 31858 Da    PI: 5.634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01168.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.51.6e-3361303127
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                        G+ F Ptdeel+veyL kk+++++l++ +vik v+  ++ P +L  +    ++kewyfF++r +kya+g+r+nr++ + +Wka+  dk+++ 
  Migut.A01168.1.p   6 LGYCFVPTDEELIVEYLLKKIDNQPLPA-DVIKVVNFSDHGPDTLTrEYPPVGHKEWYFFTPRIRKYAKGSRPNRTAGNRFWKASSADKDIKF 97 
                       5999************************.99**************8445556999*************************************9 PP

               NAM  95 kkgelvglkktLvfykg.rapkgektdWvmheyr 127
                        +++ +g k tL f++g + ++g ktdW+ hey+
  Migut.A01168.1.p  98 -NNKIIGHKMTLGFHEGiSLKDGIKTDWITHEYT 130
                       .999************988999***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-374139IPR003441NAC domain
PROSITE profilePS5100536.2154153IPR003441NAC domain
PfamPF023652.9E-177130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MESYSLGYCF VPTDEELIVE YLLKKIDNQP LPADVIKVVN FSDHGPDTLT REYPPVGHKE  60
WYFFTPRIRK YAKGSRPNRT AGNRFWKASS ADKDIKFNNK IIGHKMTLGF HEGISLKDGI  120
KTDWITHEYT AIHPSWNKRD VDDNMKVKNV SKSSSANKRQ ANLLENQQEE EKEEEVAVRE  180
NRGEEEVVAS LGNIYHAGMP LVVEDEEIIH AGCMQIVQDQ NPEEVGGVRE VVAENANANA  240
IPISWLDDFI DINAILMTKV LGFGHVCAAE NKNFMRIKRI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-30712918138Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01168.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829799.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022RXK40.0A0A022RXK4_ERYGU; Uncharacterized protein
STRINGMigut.A01168.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14648210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-29NAC domain containing protein 32