PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01167.1.p
Common NameMIMGU_mgv11b018210mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 275aa    MW: 31903.6 Da    PI: 6.1868
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01167.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.67.8e-3051142127
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                        pG+rF Ptdeel+veyL +k+++++l+++     ++i++++             ewyfF++r +kya+g+r+nr++ + +Wka+  dk++  
  Migut.A01167.1.p   5 SPGYRFVPTDEELIVEYLLRKIDNQPLPAD-----ANIHQLDT-----------WEWYFFTPRIRKYANGSRPNRTAGNRFWKASCADKAINF 81 
                       59************************9994.....45544333...........489***********************************9 PP

               NAM  95 kkgelvglkktLvfykg.rapkgektdWvmheyr 127
                        +++ +g k tLvf++g ++++g +tdW+mhey+
  Migut.A01167.1.p  82 -NNKIIGHKMTLVFHEGrSSKDGINTDWIMHEYT 114
                       .999************94567899*********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.3921135IPR003441NAC domain
SuperFamilySSF1019413.66E-363122IPR003441NAC domain
PfamPF023652.7E-216114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MESYSPGYRF VPTDEELIVE YLLRKIDNQP LPADANIHQL DTWEWYFFTP RIRKYANGSR  60
PNRTAGNRFW KASCADKAIN FNNKIIGHKM TLVFHEGRSS KDGINTDWIM HEYTAIHPSR  120
NKRDANDNMK NVLKSSSSNK RRANVQENQE EEEQEQVAVR ENRGEEEVVA SHCNINHAGV  180
QLVVEDQNQE EEVCVANKDQ FYRIINNIKA EMEMDQPDNS ELLMSAGEKE SFLKIYQKYR  240
TLVGDREINR AGCMQLVQDQ NPEKERGFRK VASK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-35312016147NO APICAL MERISTEM PROTEIN
1ut4_B5e-35312016147NO APICAL MERISTEM PROTEIN
1ut7_A5e-35312016147NO APICAL MERISTEM PROTEIN
1ut7_B5e-35312016147NO APICAL MERISTEM PROTEIN
3swm_A5e-35312019150NAC domain-containing protein 19
3swm_B5e-35312019150NAC domain-containing protein 19
3swm_C5e-35312019150NAC domain-containing protein 19
3swm_D5e-35312019150NAC domain-containing protein 19
3swp_A5e-35312019150NAC domain-containing protein 19
3swp_B5e-35312019150NAC domain-containing protein 19
3swp_C5e-35312019150NAC domain-containing protein 19
3swp_D5e-35312019150NAC domain-containing protein 19
3ulx_A5e-35511316138Stress-induced transcription factor NAC1
4dul_A5e-35312016147NAC domain-containing protein 19
4dul_B5e-35312016147NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01167.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829798.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022RUG30.0A0A022RUG3_ERYGU; Uncharacterized protein
STRINGMigut.A01167.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14648210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.12e-36NAC domain containing protein 3