PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01004.1.p
Common NameLOC105961620, MIMGU_mgv1a010189mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 320aa    MW: 35780.8 Da    PI: 9.1307
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08264308445
                       S-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45 
                       W++ Ed+ l++a k ++++    +W++Ia+ ++ g+t   c  r  
  Migut.A01004.1.p 264 WSASEDLALLNALKTFPKDvvsmRWEKIAASVP-GKTKSACMARVK 308
                       *********************************.****99*98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.506165234IPR017877Myb-like domain
SMARTSM007170.24169222IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-7256309IPR009057Homeodomain-like
PROSITE profilePS500907.666256311IPR017877Myb-like domain
SMARTSM007175.9E-6260313IPR001005SANT/Myb domain
SuperFamilySSF466894.84E-8260310IPR009057Homeodomain-like
CDDcd001671.25E-7264311No hitNo description
PfamPF002491.0E-7264310IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005783Cellular Componentendoplasmic reticulum
GO:0005886Cellular Componentplasma membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MEFLDEFESK PRFLFQSKQQ HFTQSETPDD SPCSSSFRFI CVSIFAVFFI LSFIYINVEP  60
LRSLLLWICF SLVIGPFAPS SLTAGDIRVG LGPPLTQIPT NASLDIINDK FNRKSTKTLK  120
KTPEDAPAAV HFEKSTIKDG SLVDKSKSKS QSKSKSESES ESDATEKTKS SEWNEFDDEL  180
LRKLMGKHPV GMPGRWEAIA EGFKGNHKIE TVITKAKEMK GVSNSDRDSY NKFLKDRKSV  240
DKRVIDEGLN ANENVEQEKK ESGWSASEDL ALLNALKTFP KDVVSMRWEK IAASVPGKTK  300
SACMARVKDL KKDFRSSKA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01004.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841307.10.0PREDICTED: dnaJ homolog subfamily C member 1
TrEMBLA0A022R2F90.0A0A022R2F9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA126681011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.11e-54MYB_related family protein