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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.A00994.1.p |
Common Name | MIMGU_mgv1a022878mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
ERF |
Protein Properties |
Length: 264aa MW: 28580.1 Da PI: 8.6275 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.A00994.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 133 | 183 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp +ng +r++lg++ tae+Aa a+++a+ +++g
Migut.A00994.1.p 133 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDRAAYCMRG 183
8********.***********9987..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MMYGKDEDYE ADLALLESIR RHLLDDSQLM INPLTFSNNI NGGIEAVVSS SLPQMASNPP 60 APKETNIYSD DIFRYGVFSG GATANIGWQP LLDAAPAIVK TETHFSFGNP ETILNFQAAA 120 PPMEVAAPHR GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTYETAEDA AVAYDRAAYC 180 MRGSRALLNF PLRINSGEPA PVRVTAKRSA AAAASSDSSS SSNSENGLMR KRKAAAAETV 240 GRRGCKVGHK SGQVVEYKMS EWE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208999 | 4e-45 | AC208999.1 Populus trichocarpa clone POP021-B12, complete sequence. |