PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00957.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 285aa    MW: 31134.7 Da    PI: 8.1445
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00957.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00086223223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      +C+ C+k F +   L  H+r+H
  Migut.A00957.1.p  2 ECKLCSKKFINGKALGGHMRSH 23
                      7********************9 PP
2zf-C2H214.88.4e-05150172123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C+++F+++  L +H  +H
  Migut.A00957.1.p 150 HRCESCDRVFKSSQGLGSHRASH 172
                       79*****************9998 PP
3zf-C2H2110.0014201223123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ykC+ C+k F +   L  H r+H
  Migut.A00957.1.p 201 YKCSFCDKIFGSYQALGGHKRSH 223
                       9******************9999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.93123IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.554128IPR007087Zinc finger, C2H2
SuperFamilySSF576672.3E-8223No hitNo description
PfamPF139127.9E-7225IPR007087Zinc finger, C2H2
PROSITE patternPS000280323IPR007087Zinc finger, C2H2
SuperFamilySSF576672.3E-8145172No hitNo description
PfamPF139126.9E-7149173IPR007087Zinc finger, C2H2
SMARTSM003550.23150172IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.702150177IPR007087Zinc finger, C2H2
PROSITE patternPS000280152172IPR007087Zinc finger, C2H2
PfamPF139123.1E-10200224IPR007087Zinc finger, C2H2
SuperFamilySSF576671.3E-5200224No hitNo description
SMARTSM003550.0053201223IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.242201223IPR007087Zinc finger, C2H2
PROSITE patternPS000280203223IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MECKLCSKKF INGKALGGHM RSHYATLPLP PKTPQRQELS EPPPPPPPPS SESTSSDERE  60
SSTGEKSSLS YGLRGNPRKS YRLVDPEFYD VGSDASETES TRVRSKRAKV TTAAAATELG  120
IEEELALCLV MLSRDVWASS TESRTSQKVH RCESCDRVFK SSQGLGSHRA SHNKTTTTKN  180
TISSSDYDGG CQKKPEIAIV YKCSFCDKIF GSYQALGGHK RSHYFPSRDK FEEPAAAIDL  240
NVPASMEDEE GEKACMNRSS YVDLTTGSVR TGTRTGTEPG VNRF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00957.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842041.10.0PREDICTED: zinc finger protein ZAT1-like
TrEMBLA0A022QZZ30.0A0A022QZZ3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.16e-26C2H2-like zinc finger protein