![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.A00718.1.p | ||||||||
Common Name | MIMGU_mgv1a024960mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 342aa MW: 38175.4 Da PI: 5.9694 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.9 | 4.8e-29 | 156 | 214 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs+fprsYYrC+s+ gC ++k+ve s +dp ++itY+ eH h+ Migut.A00718.1.p 156 SDMWAWRKYGQKPIKGSPFPRSYYRCSSSkGCLARKQVEESCTDPGKFIITYTAEHSHS 214 79*************************998****************************8 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-29 | 141 | 216 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.76E-25 | 150 | 216 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.732 | 150 | 216 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.2E-33 | 155 | 215 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.2E-24 | 157 | 213 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 342 aa Download sequence Send to blast |
MADQLVADME DWSLQAIVRG SSGDYAKIAD TEMDGHDSFF DNHDQFDPRE FLSSSAAGFP 60 EMFAGSSEEL QELYKPFYHP AAVTTTTTTS TSPPVHTGTV LDFQQDQKLQ NILEDDSKQK 120 LARVSPAAAA YTPKYKKRKN QHKRVVVQVS AEGLASDMWA WRKYGQKPIK GSPFPRSYYR 180 CSSSKGCLAR KQVEESCTDP GKFIITYTAE HSHSQPTRRN SLAGTVRQKF PSPSSKTTPN 240 NNISRPAKQD LKAADVAMSP PMKTLADDHH HEARIKEEMI NRQEKEGVVE EDGGDFMASD 300 FVFNEEFFSG LEDFDQFMAA ELPGCHATAQ QFPVRSCSSW F* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 3e-17 | 157 | 217 | 18 | 80 | Disease resistance protein RRS1 |
5w3x_D | 3e-17 | 157 | 217 | 18 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00448 | DAP | Transfer from AT4G23550 | Download |
![]() |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.A00718.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854209.1 | 0.0 | PREDICTED: probable WRKY transcription factor 29 isoform X1 | ||||
TrEMBL | A0A022Q431 | 0.0 | A0A022Q431_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.A00718.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5781 | 23 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G23550.1 | 3e-50 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.A00718.1.p |