PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

BES1

Protein Properties

Length: 682aa MW: 76941.3 Da PI: 6.5494

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.A00486.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	135.4	5.9e-42	68	185	3	119
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 + rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+V++AL+re Gw+v++DGttyr++s + ++ + +++s+++++s Migut.A00486.1.p 68 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALARESGWTVDHDGTTYRHSSPSPMQPPPIAHFNSVQQNNSNV 160 789*****************************************************************6654444444555555555544433 PP DUF822 96 .sslkssalaspvesysaspksssf 119 ++ l+ + s spk+ s+ Migut.A00486.1.p 161 pNVGAHPVLSGESPLFSGSPKNCSM 185 1222222222223333333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	9.1E-44	68	228	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	3.52E-155	244	678	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	2.0E-167	247	678	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	4.7E-80	269	640	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	284	298	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	305	323	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	327	348	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	420	442	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	493	512	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	527	543	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	544	555	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	562	585	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	1.2E-53	600	622	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence Send to blast
MNTNTTMNHR FAAAAEDLDV HESPAPPTTT STHPFQPQPQ RRPRGFAATN SNNNNTTATT 60 TSGGTPTKSR KEREKEKERT KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVIAALA 120 RESGWTVDHD GTTYRHSSPS PMQPPPIAHF NSVQQNNSNV PNVGAHPVLS GESPLFSGSP 180 KNCSMRSALD CQPSALRLDE NLSPASLDSV VPDRDGKVDK YSITSAINSS ECLDPDQFVH 240 ANGISGTSYI PVYVRLSTGL INNFCQLMDP EGVKEELQHL KSLRVDGVVV DCWWGIVEAW 300 SPKKYEWAGY RELFNIIREF GMKLQVVMAF HEYGGNDSGG IFISLPQWVL EIGKSNQDIF 360 FTDREGRRNT ECLSWGIDKE RVLRGRTGVE MYFDFMRSFR TEFDDLFTEG LISGVEIGLG 420 VCGELKYPSF SERMGWKYPG IGEFQCYDKY LLQNLEKAAK LRGNPFWARG PENAGHYNSK 480 PHETGFFCER GDYDSYYGRF FMNWYTQILI DHADNVLSLA SLAFEETLIL VKIPSVYWWY 540 KTTSHAAELT AGYYNPSNQD GYSRLFEVLK KHQVTMKFVI SGLHAPYQEI DGAFSDSEGL 600 NWQVLNSAWD QGLSVAGQNL QPCYDREGLV RLVETAKPRN HPDSRHFSFF VFQQPSPLIQ 660 RTICLSEIDH FIKSMHGEVS S*

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence Send to blast

MNTNTTMNHR FAAAAEDLDV HESPAPPTTT STHPFQPQPQ RRPRGFAATN SNNNNTTATT  60
TSGGTPTKSR KEREKEKERT KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVIAALA  120
RESGWTVDHD GTTYRHSSPS PMQPPPIAHF NSVQQNNSNV PNVGAHPVLS GESPLFSGSP  180
KNCSMRSALD CQPSALRLDE NLSPASLDSV VPDRDGKVDK YSITSAINSS ECLDPDQFVH  240
ANGISGTSYI PVYVRLSTGL INNFCQLMDP EGVKEELQHL KSLRVDGVVV DCWWGIVEAW  300
SPKKYEWAGY RELFNIIREF GMKLQVVMAF HEYGGNDSGG IFISLPQWVL EIGKSNQDIF  360
FTDREGRRNT ECLSWGIDKE RVLRGRTGVE MYFDFMRSFR TEFDDLFTEG LISGVEIGLG  420
VCGELKYPSF SERMGWKYPG IGEFQCYDKY LLQNLEKAAK LRGNPFWARG PENAGHYNSK  480
PHETGFFCER GDYDSYYGRF FMNWYTQILI DHADNVLSLA SLAFEETLIL VKIPSVYWWY  540
KTTSHAAELT AGYYNPSNQD GYSRLFEVLK KHQVTMKFVI SGLHAPYQEI DGAFSDSEGL  600
NWQVLNSAWD QGLSVAGQNL QPCYDREGLV RLVETAKPRN HPDSRHFSFF VFQQPSPLIQ  660
RTICLSEIDH FIKSMHGEVS S*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wdq_A	1e-121	248	678	10	444	Beta-amylase
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00543	DAP	Transfer from AT5G45300	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.A00486.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012837341.1	0.0	PREDICTED: beta-amylase 8
Swissprot	Q9FH80	0.0	BAM8_ARATH; Beta-amylase 8
TrEMBL	A0A022RB37	0.0	A0A022RB37_ERYGU; Beta-amylase
STRING	Migut.A00486.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1607	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	beta-amylase 2

Link Out ? help Back to Top
Phytozome	Migut.A00486.1.p
Entrez Gene	105957907

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]