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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.A00403.1.p |
Common Name | LOC105975347, MIMGU_mgv1a008870mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
CO-like |
Protein Properties |
Length: 361aa MW: 39572 Da PI: 5.2997 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.A00403.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 23.7 | 9.7e-08 | 11 | 42 | 4 | 35 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35
++C+ ++ ++ fC+ ++ +lC +C ++H
Migut.A00403.1.p 11 KVCDSCKASPAAVFCRADSAFLCMTCDAKIHA 42
79*****************************5 PP
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2 | zf-B_box | 27.1 | 8.5e-09 | 53 | 97 | 3 | 41 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
++C+ +e+ +++ C+ + lC+ C +H+ H++ p
Migut.A00403.1.p 53 LWVCEVCEQAPATVTCKADAASLCAACDRDIHSAnplarrHERLP 97
689*****************************6578888888765 PP
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3 | CCT | 69.6 | 8e-24 | 288 | 332 | 1 | 45 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45
Rea++lRY+eKrk+R+FeK+irY+sRKa+Ae+RpRvKGrF+k++e
Migut.A00403.1.p 288 REARVLRYREKRKNRRFEKTIRYASRKAYAETRPRVKGRFAKRSE 332
9*****************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MGAETWSLTA KVCDSCKASP AAVFCRADSA FLCMTCDAKI HAANKLASRH ARLWVCEVCE 60 QAPATVTCKA DAASLCAACD RDIHSANPLA RRHERLPAVP FYDSASAAKS SPSPSDATAA 120 AEQECSEEEA EAASWLLPNK FEEESGSPEY KSADYLFTDM DPYNLDLDLI SGEQKPQLII 180 TNDEQQQHKH YSSDGVVPVQ TKTEFGSTHY PGPVVDGFPT YEMDYPGAPK PFMYNFTSQS 240 ISQSVSSSSM EVGVVPEDHN AAMADISDST TFACKNEPPP VPVSGVDREA RVLRYREKRK 300 NRRFEKTIRY ASRKAYAETR PRVKGRFAKR SEMIEVDSLN IDASSANRHD SSSYSVVPSF 360 *
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