 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.A00320.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
CPP |
| Protein Properties |
Length: 134aa MW: 15052.3 Da PI: 5.3691 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.A00320.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 34.6 | 3.8e-11 | 46 | 80 | 5 | 39 |
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
+C+Ck+++Cl C+Cf+a+k+Cs +C+C++C+N+
Migut.A00320.1.p 46 ECECKNTQCLDDTCSCFEARKYCSTKCTCQECRNN 80
7*********************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MEEIEGSRKQ AGVPEMIRNL SDALFAVAEE EDLLNRPDAV FLEDGECECK NTQCLDDTCS 60
CFEARKYCST KCTCQECRNN IVPKSERKRE SQVIINEAPS ASVPPKRKKK RILCCRCFTT 120
DCSSIMCSCF KCN*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 86 | 108 | RKRESQVIINEAPSASVPPKRKK |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G22760.1 | 1e-06 | Tesmin/TSO1-like CXC domain-containing protein |
