PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00198.1.p
Common NameLOC105977051, MIMGU_mgv1a008924mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 359aa    MW: 39267.4 Da    PI: 6.0817
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00198.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.68.6e-19249283135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C t kTp+WR gp g+ktLCnaCG++y++ +l
  Migut.A00198.1.p 249 CVHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 283
                       *******************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169929.7E-8313339IPR016679Transcription factor, GATA, plant
SMARTSM004016.0E-19243293IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.651243279IPR000679Zinc finger, GATA-type
SuperFamilySSF577163.28E-16244307No hitNo description
Gene3DG3DSA:3.30.50.104.8E-15244281IPR013088Zinc finger, NHR/GATA-type
CDDcd002027.47E-16248295No hitNo description
PfamPF003201.4E-16249283IPR000679Zinc finger, GATA-type
PROSITE patternPS003440249274IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009416Biological Processresponse to light stimulus
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
METPEFYQTT YYNSQFTTAD NNPKNGVDAF IIEDLLDFPN DDGMVDAGDD CAALTGGTST  60
GSSPTAAPTT ADNSCNSSFS TAEPYLQTTA HGFADDHFSN ELCVPYDDLA ELEWLSNFVD  120
ESFSSEDLQK MQLIQGMKAA RTTNDSSETH QYQFQPPEAA HPTPLIPTEM SVPAKARSKR  180
PRAAPGNWTS RLLAVSTSPP AAFITAPAMS SSSESDVAVK KSGKPAAAQQ KKKEASDSSG  240
SGGGEGRRCV HCATDKTPQW RTGPMGPKTL CNACGVRYKS GRLVPEYRPA SSPTFVMTKH  300
SNSHRKVMEL RRQKEMVRAQ QNQQQQFMHH HQNMIFDVSN GDDYLIHQHI GPDYRQII*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00530DAPTransfer from AT5G25830Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00198.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857767.10.0PREDICTED: GATA transcription factor 9
TrEMBLA0A022PVN40.0A0A022PVN4_ERYGU; GATA transcription factor
STRINGMigut.A00198.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19192363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.16e-77GATA transcription factor 12