|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Medtr8g102800.1 |
Common Name | MTR_8g102800 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
|
Family |
ERF |
Protein Properties |
Length: 236aa MW: 26281.1 Da PI: 4.8501 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr8g102800.1 | genome | Mt | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.7 | 2.8e-18 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g
Medtr8g102800.1 35 PVYRGVRMRA-WGKWVSEIREPRK---KNRIWLGTFATPEMAARAHDVAALAIKG 85
68*****998.**********854...59**********************9987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MDECNHLSLP KTSSSAHLPD PVEKRPKRPR ESNHPVYRGV RMRAWGKWVS EIREPRKKNR 60 IWLGTFATPE MAARAHDVAA LAIKGNSAIL NFPELAASMP RPDSNSPRDV QAAAVKAAAM 120 EVPDQQTSSS TFSPSPPSHS LSSSSSSCSL AVSSSDEPST PDELDEIVEL PALGTSFELP 180 DPSNMVFSDP WLYSHSWYNL NSIYDERDYF MEDQISMQQE NNNSENISKY DSFWF*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC137546 | 0.0 | AC137546.33 Medicago truncatula clone mth2-24g3, complete sequence. |