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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr8g010340.1 |
Common Name | MTR_8g010340 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 289aa MW: 33398.9 Da PI: 4.5664 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr8g010340.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.1 | 3.3e-16 | 106 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +gr++AeIrdp r +r +lg+++taeeAa +++a+ +g
Medtr8g010340.1 106 KFRGVRRRR-WGRFAAEIRDP-----RlgRRRWLGTYDTAEEAALVYDRAAIDCRG 155
89****777.**********9.....556*********************987766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MEEKIIEHKS VTTKLVKSSF MSSLPKSVTI SFTDNYATDS STEDEEQHVI TTRKIVNEVR 60 FQQCSTLSNK NNKKRQEETK NKNAVVVCLE QNNENPRQIN DVVHQKFRGV RRRRWGRFAA 120 EIRDPRLGRR RWLGTYDTAE EAALVYDRAA IDCRGADAVT NIIKPPQKKR SVKDEFVCDR 180 NGYFGDNVSV EDCNGSSSYS QESVSEIWSE RMNDQEWIKE ITGEEYLDDG FTFVDESYGS 240 CSYYEPVLPT MVSNESDCIV DTIPFHLEED FESCEWEVNN YFNESLEF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT146613 | 0.0 | BT146613.1 Medicago truncatula clone JCVI-FLMt-14H5 unknown mRNA. |