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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr7g093700.1 | ||||||||
Common Name | MTR_7g093700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | C2H2 | ||||||||
Protein Properties | Length: 162aa MW: 18203.3 Da PI: 4.7799 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.7e-05 | 29 | 49 | 2 | 22 |
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 +C++C+++F++ +L H++t Medtr7g093700.1 29 PCNHCHETFRTAQDLSWHQST 49 6*****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MESDSEFLSE SDDESSTGSS IITNVAPIPC NHCHETFRTA QDLSWHQSTY TICNINRALL 60 RLNNTYHIGP PSPPPSSHTM LFPMHGSGNY NRRFHPYVRP IPEVPIVSRI DRDYNNIDGS 120 LERTMDLISL IDKPIDSAPI EELPVVWRDG STNDINLDLK L* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr7g093700.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | G7KWB3 | 1e-114 | G7KWB3_MEDTR; Putative transcription factor C2H2 family | ||||
STRING | AES81523 | 1e-115 | (Medicago truncatula) |
Link Out ? help Back to Top | |
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Phytozome | Medtr7g093700.1 |
Entrez Gene | 11443481 |
Publications ? help Back to Top | |||
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