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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr6g465850.1 |
Common Name | CBF11, MTR_6g465850 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 282aa MW: 31210.1 Da PI: 5.847 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr6g465850.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 48.9 | 1.6e-15 | 61 | 111 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +Wv+eIr p +k+++++lg+f tae+Aa+a++ a+++l+g
Medtr6g465850.1 61 PVYRGVRSRN-LDKWVCEIRQP---NKKTKIWLGTFPTAEMAARAHDVAALALKG 111
68****9666.9*********8...347***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MFTTNNSIYS HPSSSSLSHI IDEFRGLSYH RMSVSNKEVR LAVTTPKKRG GRKKFKETRH 60 PVYRGVRSRN LDKWVCEIRQ PNKKTKIWLG TFPTAEMAAR AHDVAALALK GGDACLNFAD 120 SALTLPIPAT CETKDIQKTA AEAAEAFRPG KTVMTNDVAA LALRGRNACL NFADSASRLP 180 IPATKETRDI QNAAAEATEA FRPDKTLTTN DNETAVAAAA AEEQLMFSME EEEEEEEELN 240 IPESLRNMVL MSPTHSLGHE FEHIDHGDFQ DDEVSLWSFT I*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC997208 | 0.0 | KC997208.1 Medicago truncatula genotype A17 C-repeat binding factor 11 (CBF11) gene, complete cds. |