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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g085125.1 |
Common Name | MTR_5g085125 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 171aa MW: 18779 Da PI: 5.9529 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g085125.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 37.4 | 6.4e-12 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+ Vr k g A Ird + r +++lg+f+tae+Aa+a++a + +++g
Medtr5g085125.1 15 RYRCVRKTK-YGCNCAKIRDpW-----RkPYVWLGTFDTAEQAAQAYDATATSYRG 64
5999*9888.7888******88.....449************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MCRVKAKPSA TKEIRYRCVR KTKYGCNCAK IRDPWRKPYV WLGTFDTAEQ AAQAYDATAT 60 SYRGNNAITN FPIPYNAANS VVEASRVAVG SSSTVVSRVP VATSIPAIVG EDRHNDFDAS 120 SVDVDDDEED CVITSSFRKP LNIDLNFPPP PNFNDDEEIR ATTLRLSLPS *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CR936947 | 0.0 | CR936947.2 Medicago truncatula chromosome 5 clone mte1-85h10, COMPLETE SEQUENCE. |