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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g067680.1 |
Common Name | MTR_5g067680 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
WRKY |
Protein Properties |
Length: 358aa MW: 39845.9 Da PI: 6.1521 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g067680.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89.9 | 2.1e-28 | 202 | 262 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqKe+ g ++prsYYrCt++ Cp+kk+v+r +e+p++ve+tY+geH ++
Medtr5g067680.1 202 EDGFTWRKYGQKEILGRKHPRSYYRCTHQklyLCPAKKQVQRLDENPNIVEVTYRGEHICH 262
7****************************8888*************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MEEVMNFIMR AFELAKNLEL ELPNITNHPE MLFSSIDEVE KAFNAAKERV MMMLSSQHDT 60 TTTTKPSNSF AQIPSHDVFM QKTQHAQIGG SGSAISMHAH SMDQLLLIQH PFDVSVLLEN 120 KMISGGGDVH LLRSRGTLRI GEMGGGRDVE GLDRSKGIEG DQMQGIETPP SRPKKCSRKN 180 DLEKRTEMYP APQIGNTEMP PEDGFTWRKY GQKEILGRKH PRSYYRCTHQ KLYLCPAKKQ 240 VQRLDENPNI VEVTYRGEHI CHKSLTAPSS YPPPPNLLVN ISTIETAISS QGWPPVVNHD 300 LRDGDGSGGP SNSRFGIDYP VADMADVMFN SGSSSGNSME SLFYITEDKG EPDEEKH*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT009749 | 0.0 | CT009749.1 Medicago truncatula chromosome 5 clone mth2-46e3, COMPLETE SEQUENCE. |