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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g058470.1 |
Common Name | MTR_5g058470 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 299aa MW: 33079.2 Da PI: 8.9308 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g058470.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 94 | 144 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g
Medtr5g058470.1 94 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 144
59*****998.**********9...336************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:1900030 | Biological Process | regulation of pectin biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MKVSLYKYIF FTSPNSVPIA SFTLHFENIT NKTKSHTHIK KRETPSTHTL KKTFLHPFIM 60 VKTEINKINK EKPKPKPMQQ HVLSTKAASN DKKKKYKGVR MRSWGSWVSE IRAPNQKTRI 120 WLGSYSTAEA AARAYDAALL CLKGSSATNL NFPLETSSHF IPQENISMSP KSIQRVAAAA 180 AAASSSSSSS NNDVTNTIST PPTSSSSLVS SPSMSSSPSD QIDDDVSLFS SFGACDDHYQ 240 ANDQSMAMMD SWYGFDGLLQ SPKHVDQMLS GSLFDIDSTQ VLLDDWYEEG DISLWSFY*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed cotyledons, ovules and seeds of immature siliques. {ECO:0000269|PubMed:21069430}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT146757 | 5e-60 | BT146757.1 Medicago truncatula clone JCVI-FLMt-5M3 unknown mRNA. |
GenBank | CR538723 | 5e-60 | CR538723.1 M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3, complete sequence. |