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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g057647.1 |
Common Name | MTR_5g057647, MTR_5g057810 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 300aa MW: 33947.1 Da PI: 5.7346 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g057647.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 41.6 | 3.2e-13 | 86 | 133 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52
++ykGVr +k +g+++AeIr + + +r +lg+f+tae A a+ r +
Medtr5g057647.1 86 CKYKGVRMRK-WGKFAAEIRNpF-----KgTREWLGTFDTAEAASHAYQTKRHE 133
79******99.**********55.....45**************9999887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MGPPSHKSHV SKRTRRLRII YDDPDATDSS SDEENHYVQE QGKRKRCVLE LAIPNSSINA 60 VCPVETVTDK NKSRTKPKPI VRQPSCKYKG VRMRKWGKFA AEIRNPFKGT REWLGTFDTA 120 EAASHAYQTK RHEFQVIANR RLAYEKSRKS FKNVVSKKSK IGMLHKSSSS SSPGLVNRVP 180 KLVERAKISC NEPIVESLSL LVQKPNVVED SDMTLLESDW LIFDGLGQGL DDLGCLDDLQ 240 LFDFDMNEAI DFSNFNFYEF ESNNFLDDVG ADYVDVDAES VDEDEIASWI EEPYNTPSP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP017202 | 0.0 | FP017202.3 Medicago truncatula chromosome 5 clone mth2-106m15, COMPLETE SEQUENCE. |
GenBank | FP017203 | 0.0 | FP017203.3 Medicago truncatula chromosome 5 clone mth4-9a24, COMPLETE SEQUENCE. |