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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g009620.1 |
Common Name | MTR_5g009620 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 310aa MW: 34288.9 Da PI: 4.6383 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g009620.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.8 | 7.3e-20 | 110 | 160 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +g+W+AeIrdp r r++lg+f taeeAa +++a+ kl+g
Medtr5g009620.1 110 KKYRGVRQRP-WGKWAAEIRDPA----RgVRVWLGTFQTAEEAAIVYDNAAIKLRG 160
59********.**********82....36*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MTTKKNTHLL NLTKENTPKQ PFPKIVRITV TDNDATDCSS DEEESYTTHF LDRNRGIKFV 60 DEIIIEPCTV SKNNNTISNG NGNGVVSRKR NRNRTTGGRK TRAPVSIPAK KYRGVRQRPW 120 GKWAAEIRDP ARGVRVWLGT FQTAEEAAIV YDNAAIKLRG PDALTNFITP PVSAAATCQL 180 SSPPPENEIP LSSLPLPANS GEESQSQNNN NKSLFSPTSV LQCCSSSEEV AESESMFSIP 240 SDIQFDFQDS SQANDAFYNF NGFSESMLYG DIGFEYFDFG LESLQTHKDE DFFQDIDDLF 300 ASDTTVLAL*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 87 | 93 | RKRNRNR |
2 | 88 | 93 | KRNRNR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CR962124 | 0.0 | CR962124.2 Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE. |