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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g008790.1 |
Common Name | MTR_5g008790 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 163aa MW: 18322.4 Da PI: 4.6421 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g008790.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 16 | 65 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
+++kGVr++k +g+Wv+eIr+p g + r +lg++ t+e Aa a++ a +l+
Medtr5g008790.1 16 KKFKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYATPEAAAVAHDVAFYCLK 65
59*****998.**********8...3.35*******************9988775 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 163 aa
Download sequence Send
to blast |
MNWSTSTTST SDDSNKKFKG VRRRKWGKWV SEIRVPGTQE RLWLGTYATP EAAAVAHDVA 60 FYCLKRPSTL DKLNFPDILS SYCIQQRDNL MSPRSVQKVA SDVAMDVDAR NIASQATTLP 120 EMNHMDNVVP DDVFWWDGLG DDQGVSCSQQ QEDLNISIED YL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CU469552 | 0.0 | CU469552.2 Medicago truncatula chromosome 5 clone mth2-190a9, COMPLETE SEQUENCE. |