|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Medtr4g086190.1 |
Common Name | MTR_4g086190 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
|
Family |
ERF |
Protein Properties |
Length: 232aa MW: 25994.1 Da PI: 4.884 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr4g086190.1 | genome | Mt | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.5 | 5.1e-21 | 94 | 144 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr+++ +g+W+AeIrdp+ r r++lg+f taeeAa+a+++a+ +++g
Medtr4g086190.1 94 KKYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFTTAEEAARAYDNAAIEFRG 144
59********.**********82....48************************998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MNYYSPAALT SDQELSAIVA ALTNVVSGST STAYSIPEFS PTDSTVGSSS SSLERIVPAV 60 NIVSCRECNI AGCLGCNFFP EEKKQKQKQK RAKKKYRGVR QRPWGKWAAE IRDPRRAVRV 120 WLGTFTTAEE AARAYDNAAI EFRGPRAKLN FPVVDESLKN VVDPEVVVPL EDIKDENMNQ 180 EIQIETTMGF ESNKNCDFWD SIGEADFQQL MRFMDFDRDS SDSRTWNTFS S*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC148348 | 0.0 | AC148348.6 Medicago truncatula clone mth2-28b4, complete sequence. |
GenBank | AC225538 | 0.0 | AC225538.2 Medicago truncatula clone mth2-68m14, complete sequence. |
Publications
? help Back to Top |
- Young ND, et al.
The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature, 2011. 480(7378): p. 520-4 [PMID:22089132] - Matsuo M,Oelmüller R
REDOX RESPONSIVE TRANSCRIPTION FACTOR1 is involved in age-dependent and systemic stress signaling. Plant Signal Behav, 2015. 10(11): p. e1051279 [PMID:26479402] - Bertea CM,Narayana R,Agliassa C,Rodgers CT,Maffei ME
Geomagnetic Field (Gmf) and Plant Evolution: Investigating the Effects of Gmf Reversal on Arabidopsis thaliana Development and Gene Expression. J Vis Exp, 2018. [PMID:26649488] - Bahieldin A, et al.
Ethylene responsive transcription factor ERF109 retards PCD and improves salt tolerance in plant. BMC Plant Biol., 2016. 16(1): p. 216 [PMID:27716054] - Huang D,Lin W,Deng B,Ren Y,Miao Y
Dual-Located WHIRLY1 Interacting with LHCA1 Alters Photochemical Activities of Photosystem I and Is Involved in Light Adaptation in Arabidopsis. Int J Mol Sci, 2018. [PMID:29112140] - Kong X, et al.
PHB3 Maintains Root Stem Cell Niche Identity through ROS-Responsive AP2/ERF Transcription Factors in Arabidopsis. Cell Rep, 2018. 22(5): p. 1350-1363 [PMID:29386120]
|