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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr4g009260.1 |
Common Name | MTR_4g009260 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 208aa MW: 22876.9 Da PI: 11.0737 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr4g009260.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65 | 1.5e-20 | 76 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +grW AeIrd r r++lg+f+taeeAa+a++aa+++l+g
Medtr4g009260.1 76 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 125
59*******.**********32....25*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MNIESFSHDP TTTITTTLNL PKHNPSLEGI AAIVGEQILF GPHHNKTTPS TCVSNPKTLT 60 LTEPTKTNNT NPLQKNYRGV RKRPWGRWSA EIRDRIGRCR HWLGTFDTAE EAARAYDAAA 120 RRLRGSKART NFKIPSVLPV PLSPTSSSSS SDMKGKNKKS VRNSVRKCCV VSSVGELFSG 180 VPEVRRERDN NDNGNGVFGG RSTRMVM*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 4e-18 | 75 | 134 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 2e-17 | 77 | 132 | 15 | 71 | Ethylene-responsive transcription factor ERF096 |
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |