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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr3g105510.1 |
Common Name | MTR_3g105510 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
ERF |
Protein Properties |
Length: 245aa MW: 27407 Da PI: 5.5045 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr3g105510.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.7 | 5.8e-18 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ykGVr +k +g+Wv+eIr p++ r r++lg++++ae+Aaka +aa +l+g
Medtr3g105510.1 35 KKYKGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAAKAFDAALYCLRG 85
59******99.**********933...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MDHHHHHVTT GQVKTPPSSS SSSTSSGNND NKTEKKYKGV RLRKWGKWVS EIRLPNSRER 60 IWLGSYDSAE KAAKAFDAAL YCLRGRHANF NFLDTPLNLD INAVSNNSLT PQQIREVAAN 120 FANKNPPIID NNNNGNNSNV QSNMVTEIGG SSSTTTMYNN GSTIDWTFLN MLDGSNTHDA 180 NFVGSDYGLL YSDLDKMMHS GELMYSIPPP PLFEDYQNLS SVEEYDDDNG DPFSHQSFLW 240 NWNF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CU012056 | 0.0 | CU012056.10 M.truncatula DNA sequence from clone MTH2-157G22 on chromosome 3, complete sequence. |