|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Medtr3g102100.2 |
Common Name | MTR_3g102100 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
|
Family |
ERF |
Protein Properties |
Length: 173aa MW: 19813.3 Da PI: 9.0668 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr3g102100.2 | genome | Mt | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56 | 9.7e-18 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
Medtr3g102100.2 44 PYRGIRKRK-WGKWVAEIREP---NKRSRIWLGSYITPVAAARAYDTAVFYLRG 93
69****999.**********9...336*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 173 aa
Download sequence Send
to blast |
MVQQSESTRR IMEEERDCCS TIIRNIESNN KPQEKHNKQQ LEKPYRGIRK RKWGKWVAEI 60 REPNKRSRIW LGSYITPVAA ARAYDTAVFY LRGPTARLNF PELLLEDDEE NKDGSIQQGN 120 MSADLIRKKA TKVGARVDAL QAALQASSRS DSDQFNADVK PDLNKFPEPE DY*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed at low levels in flowers, leaves, and stems, and at very low levels in roots. {ECO:0000269|PubMed:9192694}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC122728 | 0.0 | AC122728.32 Medicago truncatula clone mth2-22l4, complete sequence. |
GenBank | BT147525 | 0.0 | BT147525.1 Medicago truncatula clone JCVI-FLMt-6F9 unknown mRNA. |