PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g086340.1
Common NameMTR_2g086340
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 325aa    MW: 36692.5 Da    PI: 9.9193
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g086340.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.9e-12242293556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      +r+rr+ kNRe+A rsR+R++a++ eLe +   L++eN++Lk+ l e + + 
  Medtr2g086340.1 242 RRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQVLAEAESKR 293
                      69****************************************8777666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-9238299IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887240292IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-11241293No hitNo description
PfamPF001703.1E-10242295IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-9242290No hitNo description
PROSITE patternPS000360245260IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MALQQLDQEV PLQEQEATFS QPSKQTSILS LTLDEFQCKS GKSFSSLNMD EFLASIWSSN  60
DEATTHTHNT KNVVTTQHTI SQQFGNSFSV PPPICKKTVD EVWSEIHKNQ QQFKETNNLK  120
RSETLKKQQT LGEMSLEDFL VKAGVVQQSS ALPFKNHNGN VSSNMRPLNI ASCYGLRPSM  180
GMGFSTQCVS RNGLATYQML SHNNNLGVKD FAVEKCQSLT ESSGCSNRKR IVEGPPEVVV  240
ERRQRRMLKN RESAARSRAR RQAYTVELEA ELNLLKEENE KLKQVLAEAE SKRKQELLQR  300
KHSTKAQKGA EKLRAMRRPI STTW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g086340.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003596807.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLG7ITR90.0G7ITR9_MEDTR; BZIP transcription factor
STRINGAES670580.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.18e-46bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]